k-dense-ai/scientific-agent-skills 已索引

源文件证据覆盖

已存储的包版本在这个仓库中引用的固定源文件的原始计数。它反映已记录了什么，不代表仓库有多完整。

引用了 177 个固定源文件

• 177 已知
• 0 提交中不存在
• 0 文件列表截断
• 0 不受支持
• 0 尚无记录
• 0 读取失败

按仓库、提交和路径去重；同一路径出现在两个提交中，按两个文件身份计数。不是组件组数。

读取失败的提交 0

尚无记录的文件没有对应的提交读取失败记录。

关联的包 177

按仓库的已验证身份关联。数量是历史登记记录，不是当前可用性。

第 1–20 条，共 177 条结果

• 13c-metabolic-flux技能

  Estimates intracellular metabolic fluxes from steady-state carbon-13 isotope-tracing measurements using validated atom maps, mfapy isotope simulation, constrained multistart fitting, and flux-profile diagnostics. Use for 13C-MFA, carbon tr…

  154988403bb5

• adaptyv技能

  Uses the Adaptyv Bio Foundry API and Python SDK to design protein characterization experiments, estimate costs, submit sequences, monitor laboratory progress, and retrieve results. Applies to Adaptyv Foundry, its target catalog, binding sc…

  154988403bb5

• aeon技能

  This skill should be used for time series machine learning tasks including classification, regression, clustering, forecasting, anomaly detection, segmentation, and similarity search. Use when working with temporal data, sequential pattern…

  154988403bb5

• alphagenome技能

  Looks up precomputed AlphaGenome Atlas effects for any GRCh38 single-nucleotide variant (AVI score with Phred and 18 SHAP feature attributions, plus raw and quantile scores for RNA-seq, DNase, ATAC, ChIP-TF, ChIP-histone, CAGE, PRO-cap, sp…

  154988403bb5

• analytical-method-validation技能

  Plans, executes, and documents validation, verification, and transfer of analytical procedures under the governing framework - ICH Q2(R2) and Q14, USP <1220>/<1225>/<1226>, ICH M10 bioanalytical, CLSI EP, or ISO/IEC 17025. Use for HPLC, LC…

  154988403bb5

• anndata技能

  Handles annotated matrices in single-cell analysis, .h5ad and Zarr files, and integration with the scverse ecosystem. This is the data format skill—for analysis workflows use scanpy; for probabilistic models use scvi-tools; for population-…

  154988403bb5

• arbor技能

  Applies Arbor Hypothesis Tree Refinement to research artifacts with repeatable evaluators, including model training, agent harnesses, data synthesis and benchmark optimization. Uses persistent hypotheses, isolated experiments, evidence pro…

  154988403bb5

• arboreto技能

  Infers candidate gene regulatory networks from bulk or single-cell expression data using AertsLab Arboreto GRNBoost2 and GENIE3. Use for transcription factor-target association ranking, compatible Dask execution, sparse expression inputs, …

  154988403bb5

• astropy技能

  Core Python library for astronomy and astrophysics workflows that need Astropy APIs, including units/quantities, coordinates, FITS I/O, tables, time systems, WCS, and cosmology. Use when implementing or debugging astronomical data analysis…

  154988403bb5

• autoskill技能

  Analyzes user-requested Screenpipe history windows to detect repeated research workflows, match existing scientific skills, and stage new skill drafts or composition recipes for review. Requires a reachable Screenpipe HTTP API, normally on…

  154988403bb5

• benchling-integration技能

  Benchling Python SDK and REST API integration for registry entities, inventory, ELN entries, workflows, Benchling Apps, and Data Warehouse queries. Use when automating lab data with benchling-sdk or the v2 API.

  154988403bb5

• bgpt-paper-search技能

  Searches BGPT scientific papers by topic or DOI and retrieves claim-level evidence extracted from full text, including experiments, reported statistics, scope, limitations, and provenance. Use for literature reviews, evidence synthesis, an…

  154988403bb5

• bids技能

  Organizes, queries, validates, and converts Brain Imaging Data Structure (BIDS) datasets. Supports organizing neuroscience and biomedical data (MRI, EEG, MEG, iEEG, PET, microscopy, NIRS, motion capture, EMG, MR spectroscopy, behavioral), …

  154988403bb5

• biopython技能

  Provides Biopython workflows for sequence manipulation, file parsing (FASTA/GenBank/PDB), phylogenetics, and programmatic NCBI/PubMed access (Bio.Entrez). Supports batch processing, custom molecular-biology pipelines, BLAST automation, str…

  154988403bb5

• bioservices技能

  Provides a Python interface to bioinformatics services including UniProt, KEGG, ChEMBL, Reactome, QuickGO, and UniChem. Used for cross-database protein annotation, pathway retrieval, chemical identifier mapping, and integrated biological d…

  154988403bb5

• bulk-rnaseq技能

  Prepares bulk RNA-seq FASTQ, Salmon, STAR or featureCounts output for gene-level differential expression. Covers nf-core/rnaseq and standalone quantification, biological replication, strandedness, reference provenance, validated count asse…

  154988403bb5

• cantera技能

  Runs Cantera homogeneous chemical reactors and evaluates ignition delay with mechanism provenance, conservation checks, and numerical refinement. Use for combustion kinetics, closed adiabatic ideal-gas constant-volume or constant-pressure …

  154988403bb5

• cellprofiler技能

  Runs reproducible CellProfiler microscopy pipelines for nuclear segmentation, cell counts, and per-object fluorescence measurements. Supports image/channel manifests, headless batch execution, segmentation overlays, and measurement QC for …

  154988403bb5

• cellxgene-census技能

  Queries the CZ CELLxGENE Census programmatically for versioned public single-cell and spatial transcriptomics data. Use when you need population-scale cell metadata, gene expression slices, Census summary counts, source H5AD URIs/downloads…

  154988403bb5

• cirq技能

  Google quantum computing framework. Use when targeting Google Quantum AI hardware, designing noise-aware circuits, or running quantum characterization experiments. Best for Google hardware, noise modeling, and low-level circuit design. For…

  154988403bb5

已保存的扫描说明 0

没有保存额外的扫描说明。

记录的别名 0

这些名称在上次记录时指向这个仓库。这是记录下来的解析结果，不是实时的 GitHub 检查；本站不会因此合并包或元数据。

没有记录到指向这个仓库的别名。

不支持的市场条目 0

这个仓库的市场清单里、本站暂不支持的条目。它们是原样保存的来源数据，不会被抓取或执行。

没有记录到不支持的条目。